Package: inlabru Type: Package Title: Bayesian Latent Gaussian Modelling using INLA and Extensions Version: 2.15.0.9005 Authors@R: c( person("Finn", "Lindgren", email = "finn.lindgren@gmail.com", role = c("aut", "cre", "cph"), comment = c(ORCID = "0000-0002-5833-2011", "Finn Lindgren continued development of the main code")), person("Fabian E.", "Bachl", email = "bachlfab@gmail.com", role = c("aut", "cph"), comment = "Fabian Bachl wrote the main code"), person("David L.", "Borchers", email = "dlb@st-andrews.ac.uk", role = c("ctb", "dtc", "cph"), comment = "David Borchers wrote code for Gorilla data import and sampling, multiplot tool"), person("Daniel", "Simpson", email = "dp.simpson@gmail.com", role = c("ctb", "cph"), comment = "Daniel Simpson wrote the basic LGCP sampling method"), person("Lindesay", "Scott-Howard", email = "lass@st-andrews.ac.uk", role = c("ctb", "dtc", "cph"), comment = "Lindesay Scott-Howard provided MRSea data import code"), person("Andy", "Seaton", email = "andy.e.seaton@gmail.com", role = c("ctb"), comment = "Andy Seaton provided testing, bugfixes, and vignettes"), person("Man Ho", "Suen", email = "m.suen19@imperial.ac.uk", role = c("ctb", "cph"), comment = c(ORCID = "0009-0003-2281-0776", "Man Ho Suen contributed features for aggregated responses and vignette updates")), person("Pierre", "Roudier", email = "", role = c("ctb", "cph"), comment = "Pierre Roudier contributed general quantile summaries"), person("Tim", "Meehan", email = "tmeeha@gmail.com", role = c("ctb", "cph"), comment = "Tim Meehan contributed the SVC vignette and robins data"), person("Niharika", "Reddy Peddinenikalva", role = c("ctb", "cph"), comment = "Niharika Peddinenikalva contributed the LGCP residuals vignette"), person("Dmytro", "Perepolkin", email = "dperepolkin@gmail.com", role = c("ctb", "cph"), comment = "Dmytro Perepolkin contributed the ZIP/ZAP vignette"), person("Novica", "Nakov", email = "nnovica@gmail.com", role = c("ctb"), comment = c(ORCID = "0009-0005-7773-7718")), person("Hans", "Montcho", email = "hansmontcho@yahoo.fr", role = c("ctb", "cph"), comment = c(ORCID = "0000-0003-2510-2102", "Hans Montcho contributed features for joint cross validation")) ) URL: http://www.inlabru.org, https://inlabru-org.github.io/inlabru/, https://github.com/inlabru-org/inlabru BugReports: https://github.com/inlabru-org/inlabru/issues Description: Facilitates spatial and general latent Gaussian modelling using integrated nested Laplace approximation via the INLA package (). Additionally, extends the GAM-like model class to more general nonlinear predictor expressions, and implements a log Gaussian Cox process likelihood for modelling univariate and spatial point processes based on ecological survey data. Model components are specified with general inputs and mapping methods to the latent variables, and the predictors are specified via general R expressions, with separate expressions for each observation likelihood model in multi-likelihood models. A prediction method based on fast Monte Carlo sampling allows posterior prediction of general expressions of the latent variables. Ecology-focused introduction in Bachl, Lindgren, Borchers, and Illian (2019) . License: GPL (>= 2) Additional_repositories: https://inla.r-inla-download.org/R/testing Encoding: UTF-8 Depends: R (>= 4.1.0) Imports: dplyr, fmesher (>= 0.7.0), generics, glue, graphics, lifecycle, MatrixModels, Matrix, methods, Rcpp, rlang, sf, stats, tibble, utils, withr Suggests: covr, ggplot2, INLA (>= 23.01.31), knitr, maps, mgcv, patchwork, raster, RColorBrewer, rgl, rmarkdown, scales, scoringRules, shiny, sn, sp (>= 2.1), spatstat.geom, spatstat.data, sphereplot, splancs, terra (>= 1.7-66), tidyterra, testthat (>= 3.2.0), tidyr, DiagrammeR, doclisting Enhances: stars Roxygen: list(markdown = TRUE) Config/testthat/parallel: true Config/testthat/edition: 3 Collate: '0_inlabru_envir.R' 'RcppExports.R' 'access_trace.R' 'access_trace_methods.R' 'bru.gof.R' 'bru.inference.R' 'bru_conversion.R' 'bru_index.R' 'deprecated.R' 'bru_input.R' 'bru_is.R' 'bru_sp.R' 'data.Poisson1_1D.R' 'data.Poisson2_1D.R' 'data.Poisson3_1D.R' 'data.gorillas.R' 'data.mexdolphin.R' 'data.mrsea.R' 'data.robins_subset.R' 'data.shrimp.R' 'data.toygroups.R' 'data.toypoints.R' 'deltaIC.R' 'effect.R' 'environment.R' 'fmesher.R' 'gcpo.R' 'ggplot.R' 'hexagon_tiling.R' 'mappers.R' 'hierarchical_basis.R' 'inla.R' 'inlabru-package.R' 'inlabru-reexports.R' 'legacy_methods.R' 'local_testthat.R' 'mapper_collect.R' 'mapper_expr.R' 'mapper_repeat.R' 'mapper_sum.R' 'model.R' 'nlinla.R' 'object_upgrade.R' 'plotsample.R' 'pred_expr.R' 'rgl.R' 'sampling.R' 'spatstat.R' 'spde.R' 'stack.R' 'tidiers.R' 'track_plotting.R' 'transformation.R' 'used.R' 'utils.R' VignetteBuilder: knitr BuildVignettes: true LazyData: true LazyDataCompression: xz LinkingTo: Rcpp Config/roxygen2/version: 8.1.0 Config/pak/sysreqs: libabsl-dev cmake libgdal-dev gdal-bin libgeos-dev libssl-dev libproj-dev libsqlite3-dev libudunits2-dev Repository: https://eliaskrainski.r-universe.dev Date/Publication: 2026-10-09 13:34:24 UTC RemoteUrl: https://github.com/inlabru-org/inlabru RemoteRef: HEAD RemoteSha: 3dc2b029b584b969fa6a9065019a78c6e8eff2d6 NeedsCompilation: yes Packaged: 2026-10-09 16:44:36 UTC; root Author: Finn Lindgren [aut, cre, cph] (ORCID: , Finn Lindgren continued development of the main code), Fabian E. Bachl [aut, cph] (Fabian Bachl wrote the main code), David L. Borchers [ctb, dtc, cph] (David Borchers wrote code for Gorilla data import and sampling, multiplot tool), Daniel Simpson [ctb, cph] (Daniel Simpson wrote the basic LGCP sampling method), Lindesay Scott-Howard [ctb, dtc, cph] (Lindesay Scott-Howard provided MRSea data import code), Andy Seaton [ctb] (Andy Seaton provided testing, bugfixes, and vignettes), Man Ho Suen [ctb, cph] (ORCID: , Man Ho Suen contributed features for aggregated responses and vignette updates), Pierre Roudier [ctb, cph] (Pierre Roudier contributed general quantile summaries), Tim Meehan [ctb, cph] (Tim Meehan contributed the SVC vignette and robins data), Niharika Reddy Peddinenikalva [ctb, cph] (Niharika Peddinenikalva contributed the LGCP residuals vignette), Dmytro Perepolkin [ctb, cph] (Dmytro Perepolkin contributed the ZIP/ZAP vignette), Novica Nakov [ctb] (ORCID: ), Hans Montcho [ctb, cph] (ORCID: , Hans Montcho contributed features for joint cross validation) Maintainer: Finn Lindgren